Enrichment score of transcription start sitesThe TSS profile is the summed accessibility signal (defined as number of cut sites per base) in a window of 2,000 bases around all the annotated TSSs, normalized by the minimum signal in the window. This metric reports the maximum value in the profile.Fraction of fragments overlapping TSSThe fraction of fragments (that passed all filters) overlapping transcription start sites, as defined by the GENCODE basic annotation.Fraction of fragments overlapping called peaksThe fraction of fragments (that passed all filters) overlapping the set of peaks called for the library.Fraction of fragments overlapping any targeted regionThe fraction of fragments (that passed all filters) overlapping targeted regions (transcription start sites, DNase hypersensitive regions, enhancer or promoter regions, as present in the reference).Fraction of total read pairs mapped confidently to genome (>30 mapq)Fraction of all the sequenced read pairs that mapped to the genome with high mapping quality. Includes unique and duplicate read pairs from any barcode.Fraction of total read pairs that are unmapped and in cell barcodesFraction of all the sequenced read pairs that come from cell barcodes and could not be mapped to the genome with confidence.Fraction of total read pairs in mitochondria and in cell barcodesFraction of all the sequenced read pairs that come from cell barcodes and map to the mitochondrial genome.Plots(left) TSS profile, as described above.(right) Targeting scatter plot. Each dot represents a barcode. Horizontal axis is the barcode's number of fragments, vertical axis is the percentage of those fragments that overlap peaks. Non-cell and cell groups are represented with different colors.