FastQCFastQC Report
Thu 8 Feb 2018
OD10_k27ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOD10_k27ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47446636
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCGG115750.013.1914571
TGGGGCG111450.010.9481881
TGGGCCG105300.010.8807891
AGGGCCG117650.010.4862571
AGGGCGG132700.010.4527191
AGGGGCG128700.010.3394771
TGGGGTT305000.09.9385831
TAGCCGA20850.09.8437451
TGGCGGC136250.09.683771
AGGCCCG111550.09.4219631
TGGCCGG130750.09.4183751
AGGGTTT288600.09.401441
TAGCCAG305500.09.2578761
TGGGGCC281950.09.1912161
TGGCGCG113150.09.14921
AGGCCGG194400.09.0958831
TGGCGAA51100.09.092251
TGGGCGG126900.08.9931941
TGGCCAG530150.08.980791
AGGCGGC145850.08.953591
Produced by FastQC (version 0.11.5)