FastQCFastQC Report
Thu 8 Feb 2018
YD7_k27ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYD7_k27ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44520575
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCGGC199150.011.033841
TAGCCGG91050.010.8528111
TGGGGCG155600.010.7872671
AGGGGCG182350.010.6894661
AGGGCCG149900.010.3094851
TGGGCCG134450.010.0175521
AGGGCGG190850.09.8587521
AGGGGCC276150.09.591161
TGGCGAC56050.09.4186421
TAGGCCG42900.09.41334151
AGGGGGC260300.09.3171351
TGGGGCC302950.09.2416361
AGGCGCC191950.09.2028371
TGGGCGG164400.09.1394591
AGGGGGG124850.09.0711691
TGGCCGG150600.09.0631351
TGGCGGA82200.09.002231
AGGCGGC210500.08.9920331
TGGGGCA232800.08.91564751
TGGGGTT272050.08.8732581
Produced by FastQC (version 0.11.5)