FastQCFastQC Report
Thu 8 Feb 2018
OD11_k27me3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOD11_k27me3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60083388
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCGG114300.011.91706851
TGGGGCG63000.09.6847641
TGGGGTT345600.09.6090081
TGGCCGG91100.08.94644451
TGGGCCG56050.08.9173871
GGGGTTT375500.08.7534322
AGGGTTT333200.08.6354721
TCCCGTT116850.08.4778211
AGGGCCG61750.08.458851
TGGGGGC252650.08.4033551
AGGGCGG69000.08.3857971
TGGCCAG556600.08.3771681
TAGGCCG29150.08.3415251
CGGCTAA85300.08.25496720
TAGCCAG362650.08.1949541
TGGGCCA237200.08.1818751
AGGGGGG108150.08.18137551
TGGCGAA50250.08.1544671
GCGTGAG129250.08.1461963
TGGGGTC208750.08.1429311
Produced by FastQC (version 0.11.5)