FastQCFastQC Report
Thu 8 Feb 2018
OD6_k27me3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOD6_k27me3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70150742
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCGG176500.012.3240821
TAGGCCG40600.010.1495611
TGGGGTT441600.09.8310561
TGGGCCG100650.09.1502241
GGGGTTT483600.09.0073082
TGGGGCG102250.08.9629971
TAGCCAG490650.08.9308581
AGGGTTT404450.08.8968061
TCCCGTT101850.08.7992221
TGGCCAG766250.08.6544011
TGGCCGG157350.08.529071
TGGCAAA403400.08.4734071
AGGGGCG116500.08.3305471
AGGGCGG123500.08.3141921
AGGCCGG192750.08.23601151
TGGCGAA69900.08.2145771
TGGGGGC373900.07.9254261
TGGGGCC348200.07.88310151
TAGGCGC27550.07.8464251
GTAGTCC357350.07.81385126
Produced by FastQC (version 0.11.5)