FastQCFastQC Report
Thu 8 Feb 2018
OD8_k27me3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOD8_k27me3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59098515
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCGG141000.011.8477311
TGGGGTT350850.09.7152691
AGGGTTT341550.09.09651851
TAGCCAG425950.08.9326121
GGGGTTT383350.08.7795572
TGGGGCG72750.08.634191
TGGCCAG595650.08.6139751
TGGCCGG105950.08.4998141
TACTCGG165900.08.20397937
AGGGGCG82300.08.1246941
TGGGCCG68450.08.1240741
TAGGCCG31400.08.102131
AGGGCGG87500.08.0278071
TGGCAAA353300.07.99105831
CTACTCG171800.07.97461436
GCGTGAG129950.07.89454133
TGGGGGT268250.07.8389441
TGGGGCC265750.07.8279691
TGGGGGC282700.07.79663661
TAGCCCG23450.07.77665041
Produced by FastQC (version 0.11.5)