FastQCFastQC Report
Thu 8 Feb 2018
YD14_k27me3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYD14_k27me3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57883301
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCGG150000.011.9619711
TGGCCGG105400.010.3808121
TGGGGTT350150.010.0944161
TAGGCCG32750.09.5551861
GGGGTTT391500.09.211662
TAGCCAG430800.09.019881
TGGCCAG599400.08.9917271
AGGGTTT338550.08.9174691
TGGGCCG67500.08.8384841
TGGCGAA55150.08.8174681
TGGCAAA344000.08.6976551
TGGGGCG64800.08.68561651
TACTCGG174400.08.61679137
TCCCGTT98700.08.5992361
CTACTCG179450.08.53727336
ACGGGGT127400.08.1287561
TGGGGCC267750.08.08033851
AGGGCGG77050.08.0644011
AGGCCGG139350.07.9971251
TGGGGGC272650.07.8855781
Produced by FastQC (version 0.11.5)