FastQCFastQC Report
Thu 8 Feb 2018
OD6_k4me4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOD6_k4me4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63181706
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCCGG170000.011.9661211
TGGGGTT371350.09.4376381
TGGCGAA50500.09.06568051
TAGCCAG497050.09.0428011
GGGGTTT429200.08.7268472
TCCCGTT103950.08.7216231
CGGGCGT92650.08.692115
TGGGGCG57150.08.6816481
GGCGAAA50250.08.6402052
AGGGTTT374250.08.5389381
TGGCCGG97100.08.4078521
TGGGCCG58300.08.3943471
TGGCCAG648800.08.3598791
ACCGCGC42100.08.33547112
AGGCGCC114700.08.3171151
TACTCGG211150.08.09745137
AGGGCGG68350.08.0839441
AGGGCCG61750.07.9618741
ACGCCCG45300.07.94566115
TAGGCCG34650.07.9405821
Produced by FastQC (version 0.11.5)