Following is a list of 185 genes found to be hallmark of hypoxia according to MsigDB. The output contains numerous experiments related to hypoxic response.
Col5a1 Tgm2 Gpc1 Phkg1 Efna1 Ampd3 Tktl1 Pnrc1 Plaur Glrx Maff Serpine1 Cited2 Gapdh Errfi1 Ets1 Aldoa Tmem45a Pdk1 Pgam2 Atf3 Aldoc Gcnt2 Pgf Gpc4 Nr3c1 Fbp1 Pgm1 Igfbp3 Tpd52 Ppfia4 Prkcdbp Ldha Rbpj Pkp1 Plac8 Dcn Igfbp1 Cdkn1c Slc37a4 Ppargc1a Ugp2 Csrp2 Bhlhe40 Hmox1 Grhpr Hk1 Jmjd6 Ndst2 Dpysl4 Hs3st1 Slc2a5 Tiparp Siah2 P4ha2 Ptrf Adm Hspa5 Pfkp Pfkfb3 Hk2 Sdc3 Gpc3 Eno2 Ddit4 Mxi1 Gys1 Cav1 Srpx Plin2 Gbe1 Ier3 Slc6a6 Ankzf1 Aldob Has1 Kdelr3 Anxa2 Bcan Brs3 Btg1 Irs2 Selenbp1 Cxcr4 Klhl24 Cdkn1a Sap30 Vhl Mif Dtna Lox Lxn Cdkn1b Map3k1 Ero1l Myh9 Pdk3 S100a4 Cp Casp6 Il6 Tnfaip3 Vldlr Pam Nedd4l Adora2b Cyr61 Noct Bnip3l Tpi1 Scarb1 Nagk Tpbg Isg20 Hoxb9 Pfkl Zfp36 Ids Klf6 Wsb1 Xpnpep1 Bcl2 Ddit3 Ldhc Pck1 Ndst1 Ppp1r15a B3galt6 Pgm2 Vegfa Sult2b1 Stc1 Kif5a Pgk1 Sdc2 Slc25a1 Rragd Jun Fos Tgfb3 Ilvbl Ctgf Gapdhs Ccng2 Dusp1 Tpst2 Lalba Ncan Ndrg1 Inha F3 Akap12 Tes Galk1 Pdgfb Slc2a3 Fosl2 Hexa Sdc4 Fam162a Wisp2 Ak4 Chst3 Egfr Eno1 Rora Ppp1r3c Efna3 Car12 Gck Large Nfil3 Tgfbi Kdm3a Edn2 Bgn Pygm Foxo3 Pklr P4ha1 Gaa Stbd1 Prkca Hdlbp Eno3